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Bacterial Genomes

Genome of an organism is its blueprint and sequencing is the first step in understanding it. In order to derive meaning out of the sequence data, annotation is performed. These processes collectively make DNA sequences a knowledge base for all genetic information. Fred Sanger invented a DNA sequencing method in the late 70’s that remains till date, the gold standard for individual genes.

Whole Genome Bisulphite Sequencing (WGBS)

Whole Genome Bisulphite Sequencing (WGBS) is an NGS based genome-wide methylation profiling application. Its application comprises identification and quantification of the methylation status of the entire genome. Epigenetic variations such as DNA methylation and histone modification account for differential expression of genes.

Genotyping with RAD and ddRAD Sequencing

Genotyping requires thousands of genomes to be compared in a reliable, consistent way. Restriction site associated DNA sequencing (RAD-Seq) interrogates a fraction of the genome across many individuals, an ideal method for genotyping.
1. By using restriction enzyme digestion and sequencing the regions adjacent to restriction sites, researchers can examine the same subset of genomic regions for thousands of individuals and identify many genetic markers along the genome.
2. Other NGS methods examine a larger portion of the genome and offer more data, but they are costly and cannot be used to study the thousands of individuals required for genotyping.

Exome Sequencing and Data Analysis

The protein coding, or exonic regions, constitute a small percentage of the eukaryotic genome (for example, ~1.5% in the case of human genome). Mutations identified in the exonic regions typically contribute to affecting the function of proteins and are more actionable than variations that occur in non-coding regions. Exome sequencing involves selective capture and sequencing of these protein coding regions of the genome. Compared to whole genome sequencing, Exome sequencing is more cost effective and also provides better per base coverage.

RNA Sequencing

RNA-Seq is a high-throughput sequencing based approach for transcriptome profiling. The information contained in the genome is transferred to RNA molecules by the process of transcription. The transcribed regions of the genome encode different types of RNA molecules, like mRNA, tRNA, rRNA, miRNA, lincRNA, snoRNA and others. The spectrum of transcribed RNA products constitute the transcriptome. In humans, the transcriptome represents an estimated 5% of the genome.

De novo Transcriptome Sequencing & Analysis

The advent of NGS technologies and their rapid advancements have revolutionized genomics research. Among them, RNA sequencing has emerged as a cost-effective means of rapidly acquiring functional sequence information for many organisms. RNA-Seq is a powerful tool for simultaneous transcriptome characterization and differential gene expression (DGE) analysis in a single cell type, tissue type, or entire organism under defined conditions. RNA-Seq has helped in decoding transcriptomes of various species, including several plants, birds, insects and animals for which no reference genome is available. RNA-Seq also provides data about alternative splicing, strand-specific expression, expression of unannotated exons (or genes), and identification of fusion genes in cancer. It also provides gene expression data at a greater sensitivity than microarrays.

NextGen LIMS

NextGen LIMS is an end-to-end work flow management system for next-gen sequencing labs. It provides an automated work flow for key functions within a next-gen lab: Project Management, Sample Management, Library Management and Sequencing Run Management. It tracks the end-to-end project progression - samples, libraries and sequencing runs through a set of pre-defined workflows; thus reducing manual intervention.


  • Vijay Yepuri, Saakshi Jalali, Nagesh Kancharla, V. B. Reddy & S. Arockiasamy Development of genome wide transposable elements based repeat junction markers in Jatropha (Jatropha curcas L.). Mol Biol Rep. June 2020 (Web Link)
  • Dilanganie N. Dissanayaka, Krishna K. Gali, Ambuj B. Jha, V.B. Reddy Lachagari, Thomas D. Warkentin, Genome-wide association study to identify SNPs associated with Fe, Zn and Se concentration in field pea (Pisum sativum L.). Crop Sci. April 2020 (Web Link)
  • Endale G. Tafesse, Krishna K. Gali, V.B. Reddy Lachagari, Rosalind Bueckert and Thomas D. Warkentin, Genome-Wide Association Mapping for Heat Stress Responsive Traits in Field Pea Int. J. Mol. Sci., 21(6), 2043, March 2020 (Web Link)
  • Kushal Suryamohan, Sajesh P. Krishnankutty, Joseph Guillory, Matthew Jevit, Markus S. Schröder , Meng Wu, Boney Kuriakose, Oommen K. Mathew, Rajadurai C. Peruma, Ivan Koludarov, Leonard D. Goldstein, Kate Senger, Mandumpala Davis Dixon, Dinesh Velayutham, Derek Vargas, Subhra Chaudhuri, Megha Muraleedharan, Ridhi Goel, Ying-Jiun J. Chen1, Aakrosh Ratan, Peter Liu, Brendan Faherty, Guillermo de la Rosa, Hiroki Shibata, Miriam Baca, Meredith Sagolla, James Ziai, Gus A. Wright, Domagoj Vucic, Sangeetha Mohan, Aju Antony, Jeremy Stinson, Donald S. Kirkpatrick, Rami N. Hannoush, Steffen Durinck, Zora Modrusan, Eric W. Stawiski, Kristen Wiley, Terje Raudsepp, R. Manjunatha Kini, Arun Zachariah and Somasekar Seshagiri The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins Nature Genetics 52(1). Jan 2020 (Web Link)
  • Ramesh S. Bhat, J. Rockey, Kenta Shirasawa, I. S. Tilak, M. P. Brijesh Patil, V. B. Reddy Lachagari DNA methylation and expression analyses reveal epialleles for the foliar disease resistance genes in peanut (Arachis hypogaea L.) BMC Research Notes (In Review) (Web Link)
  • M. K. Prasannakumar, H. B. Mahesh, Radhika U. Desai, Bharath Kunduru, Karthik S. Narayan, Kalavati Teli, M. E. Puneeth, R. C. Rajadurai, Buella Parivallal, Gopal Venkatesh Babu Metagenome sequencing of fingermillet-associated microbial consortia provides insights into structural and functional diversity of endophytes 3 Biotech 10: 15. Jan 2020 (Web Link)
  • Reddaiah Bodanapu, Sreehari V. Vasudevan, Navajeet Chakravartty, Krishna Lalam, Sivarama Prasad Lekkala, Boney Kuriakose, Chetan Bhanot, Navitha Kokkonda, George Thomas, Saurabh Gupta, Vijaya Bhasker Reddy Lachagari Deciphering the unique SNPs among leading Indian tomato cultivars using double Digestion Restriction Associated DNA sequencing Ind. Soc. of Genetics & Plt. Breeding 2019 79 :4 (Web Link)
  • Krishna K. Gali1, Alison Sackville, Endale G. Tafesse, V B R. Lachagari, Kevin E. McPhee, Miroslav Hybl, Aleksandar Mikic, Petr Smýkal, Rebecca Mcgee, Judith Burstin, Claire Domoney, Thomas H. Ellis, Bunyamin Tar'an and Tom Warkentin Genome-wide association mapping for agronomic and seed quality traits of field pea (Pisum sativum L.) Front. Plant Sci. Nov 2019 (Web Link)
  • Sai Sudha Puvvala, Tarakeswari Muddanuru, Padmavathi A. V. Thangella, O. Aniel Kumar, Navajeet Chakravartty, Vineeth Kodengil Vettath, A. V. S. K. Mohan Katta, Sivarama Prasad Lekkala, Boney Kuriakose, Saurabh Gupta, Sujatha Mulpuri, Vijaya Bhaskar Reddy Lachagari Deciphering the transcriptomic insight during organogenesis in Castor (Ricinus communis L.), Jatropha (Jatropha curcas L.) and Sunflower (Helianthus annuus L.) 3 Biotech 9: 434. Nov 2019 (Web Link)
  • U. M. Ramesh, Ramesh Methre, N. V. M. Kumar, Ishwarappa S. Katageri, S. Anjan Gowda, Sateesh Adiger, Satish Kumar Yadava, Vijay B. R. Lachagari Genome mapping and molecular markers identification for yield, yield component and fibre quality traits in tetraploid cotton Plant Breeding, July 2019 (Web Link)
  • Kumar Paritosh, Satish Kumar Yadava, Priyansha Singh, Latika Bhayana, Arundhati Mukhopadhyay, Vibha Gupta, Naveen Chandra Bisht, Jianwei Zhang, David Kudrna, Dario Copetti, Rod A Wing, Vijay Bhaskar Reddy Lachagari, Akshay Kumar Pradhan, Deepak Pental A chromosome-scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes bioRxiv June 2019 (Web Link)
  • V.B. ReddyLachagari, Reddaiah Bodanapu, Navajeet Chakravartty, Sivarama Prasad Lekkala, Krishna Lalam, Boney Kuriakose, Lakshmi Narayana R. Vemireddy, Dinesh Velayutham, George Thomas, Saurabh Gupta, Arjula R.Reddy Uncovering genome wide novel allelic variants for eating and cooking quality in a popular Indian rice cultivar, Samba Mahsuri Cur.Plant Biology, 100111, June 2019 (Web Link)
  • Lakshminarayana R. Vemireddy, Gopalakrishnamurty Kadambari, G. Eswar Reddy, Vijaya Sudhakara Rao Kola, Eswarayya Ramireddy, Venkata Ramana Rao Puram, Jyothi Badri, Suresh N. Eslavath, Swarajyalakshmi N. Bollineni, Bukya J. Naik, Sreelakshmi Chintala, Rameshbabu Pottepalem, Srividhya Akkareddy, Ranjithkumar Nagireddy, Lachagari V. B. Reddy, Reddaiah Bodanapu, Sivarama P. Lekkala, Navajeet Chakravartty & E. A. Siddiq Uncovering of natural allelic variants of key yield contributing genes by targeted resequencing in rice (Oryza sativa L.) Scientific Reports 9: 8192, June 2019 (Web Link)
  • Vinod Kumar Mishraa, Saurabh Gupta, RameshChand, Punam Singh Yadav, Satish Kumar Singh, Arun KumarJoshi, Pritish Kumar Varadwaj Comparative transcriptomic profiling of High- and Low- grain Zinc and Iron containing Indian wheat genotypes Current Plant Biology, May 2019 (Web Link)
  • V B Reddy Lachagari, Ravi Gupta, Sivarama Prasad Lekkala, Lakshmi Mahadevan, Boney Kuriakose, Navajeet Chakravartty, A. V. S. K. Mohan Katta, Sam Santhosh, Arjula R. Reddy, George Thomas Whole genome sequencing and comparative genomic analysis reveal novel allelic variations unique to a purple colored rice landrace (Oryza sativa ssp. indica cv. Purpleputtu) Front. Plant Sci.10 : 513, May 2019 (Web Link)
  • Krishna Kishore Gali, Bunyamin Tar’an, Mohammed-Amin Madoui, Edwin van der Vossen, Jan van Oeveren, Karine Labadie,Helene Berges, Abdelhafid Bendahmane, Reddy V.B. Lachagari, Judith Burstin and Tom Warkentin Development of a sequence based reference physical map of pea (Pisum sativum L.). Front. Plant Sci.10 : 323, Mar 2019 (Web Link)
  • Rahul Bodkhe, Sudarshan Anand Shetty, Dhiraj Prakash Dhotre, Anil K Verma, Khushbo Bhatia, Asha Mishra, Gurvinder Kaur, Pranav Pande, Dhinoth K Bangarusamy, Beena P Santosh, Rajadurai c Perumal, Vineet Ahuja, Yogesh S Shouche, Govind K Makharia Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives with Adult Celiac Disease Patients and Controls Frontiers in Microbiology, section Microbial Symbioses , Jan 2019 (accepted) (Web Link)
  • Nagesh Kancharla, Saakshi Jalali, J. V. Narasimham , Vinod Nair, Vijay Yepuri, Bijal Thakkar, VB Reddy, Boney Kuriakose, Neeta Madan and Arockiasamy S. De Novo Sequencing and Hybrid Assembly of the Biofuel Crop Jatropha curcas L.: Identification of Quantitative Trait Loci for Geminivirus Resistance Genes 10(1):69, Jan 2019 (Web Link)
  • Sajesh Puthenpurackal Krishnankutty, Megha Muraleedharan, Rajadurai Chinnasamy Perumal, Saju Michael, Jubina Benny, Bipin Balan, Pramod Kumar, Jishnu Manazhi, Bangaruswamy Dhinoth Kumar, Sam Santhosh, George Thomas, Ravi Gupta, Arun Zachariah Next-generation sequencing analysis reveals high bacterial diversity in wild venomous and non-venomous snakes from India. Journal of Venomous Animals and Toxins including Tropical Diseases 24:41 Page 1, Dec 2018(Web Link)
  • N. V. Mohan KumarIshwarappa S. Katageri, S. Anjan Gowda, Sateesh Adiger, Satish Kumar Yadava, V. B. Reddy Lachagari 63K SNP chip based linkage mapping and QTL analysis for fibre quality and yield component traits in Gossypium barbadense L. cotton Euphytica-International Journal of Plant Breeding 215:6, Dec 2018(Web Link)
  • Devaiah Monnanda Kalappa, Pradeep Annamalai Subramani, Sowmya Kanchanahalli Basavanna, Susanta Kumar Ghosh, Varadharajan Sundaramurthy, Sreehari Uragayala, Satyanarayan Tiwari, Anupkumar R. Anvikar and Neena Valecha. Influence of midgut microbiota in Anopheles stephensi on Plasmodium berghei infection. Malaria Journal 17:385, Oct 2018 (Web Link)
  • Gupta S, Mishra VK, Kumari S, Raavi, Chand R, Varadwaj PK. Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress. Genes Genomics, Sep 2018 (Web Link)
  • Gali KK1, Liu Y, Sindhu A, Diapari M, Shunmugam ASK, Arganosa G, Daba K, Caron C, Lachagari RVB, Tar'an B, Warkentin TD. Construction of high-density linkage maps for mapping quantitative trait loci for multiple traits in field pea (Pisum sativum L.). BMC Plant Biol.; 18(1):172, Aug 2018 (Web Link)
  • Pramod RK, Velayutham D, P K S, P S B, Zachariah A, Zachariah A, B C, S S S, P G, Dhinoth Kumar B, Iype S, Gupta R, Santhosh S, Thomas G. Complete mitogenome reveals genetic divergence and phylogenetic relationships among Indian cattle (Bos indicus) breeds. Anim Biotechnol. 23:1-14. Jun 2018 (Web Link)
  • Pramod RK, Mitra A. Intratesticular injection followed by electroporation allows gene transfer in caprine spermatogenic cells. Sci Rep. 8(1):3169 Feb 2018 (Web Link)
  • Nguyen TT, Suryamohan K, Kuriakose B, Janakiraman V, Reichelt M, Chaudhuri S, Guillory J, Divakaran N, Rabins PE, Goel R, Deka B, Sarkar S, Ekka P, Tsai YC,Vargas D, Santhosh S, Mohan S, Chin CS, Korlach J, Thomas G, Babu A, Seshagiri S. Comprehensive analysis of single molecule sequencing-derived complete genome and whole transcriptome of Hyposidra talaca nuclear polyhedrosis virus. Sci Rep. 2018 8(1):8924, 2018 (Web Link)
  • R. Kumar Pramod, Dinesh Velayutham, Sajesh P. K., Beena P. S., Anil Zachariah, Arun Zachariah, Chandramohan B., Sujith S. S., Sam Santhosh, Sosamma Iype, Ganapathi P., Bangarusamy Dhinoth Kumar, Ravi Gupta & George Thomas. The complete mitochondrial genome of Indian cattle (Bos indicus). Mitochondrial DNA Part B Resources 3(1):207-208, 2018 (Web Link)
  • Yadav S, Vaddavalli R, Siripuram S, Eedara RVV, Yadav S, Rabishankar O, Lodha T, Chintalapati S, Chintalapati V. Planctopirus hydrillae sp. nov., an antibiotic producing Planctomycete isolated from the aquatic plant Hydrilla and its whole genome shotgun sequence analysis. J Antibiot (Tokyo), 2018. (Web Link)
  • Shubhra Shukla, Sanjeev Kumar Shukla, Rolee Sharma. Species identification of aquatic mycobacterium isolates by sequencing and PCR-RFLP of the 16S–23S rDNA internal transcribed spacer (ITS) region.Gene Reports 10:26-32, 2018 (Web Link)
  • Pawar VA, Prajapati AS, Akhani RC, Patel DH, Subramanian RB. Molecular and biochemical characterization of a thermostable keratinase from Bacillus altitudinis RBDV1. 3 Biotech. 8:107, 2018 (Web Link)
  • Chopra N, Kumar A, Kaur J. Structural and functional insights into thermostable and organic solvent stable variant Pro247-Ser of Bacillus lipase. Int J Biol Macromol. 108:845-852, 2018 (Web Link)
  • Rohit Sharma, Pushpender Kumar Sharma.Metatranscriptome sequencing and analysis of agriculture soil provided significant insights about the microbial community structure and function. Ecological Genetics & Genomics 6:9-15, 2018 (Web Link)
  • S. Chandra Nayaka, H. Shekar Shetty, C.Tara Satyavathi, Rattan S. Yadav, P.B.Kavi Kishor, M. Nagaraju, T.A. Anoop, M. Milner Kumar, Boney Kuriakose, Navajeet Chakravarttye, A.V.S.K. Mohan Katta, V.B. Reddy Lachagari, Om Vir Singh, Pranav Pankaj Sahu,Swati Puranik, Pankaj Kaushal, Rakesh K. Srivastava. Draft genome sequence of Sclerospora graminicola the pearl millet downy mildew pathogen. Biotechnology Reports 16:18-20, 2017 (Web Link)
  • Suresh S Handi, Ishwarappa S. Katageri, Sateesh Adiger, Mngesh P. Jadhav, Sivarama P. Lekkala, V.B. Reddy Lachagari. Association mapping for seed cotton yield, yield components and fibre quality traits in upland cotton (Gossypium hirsutum L.) genotype. Plant Breeding 136(6):958-968, 2017 (Web Link)
  • Prateek Gupta, Bodanapu Reddaiah, Hymavathi Salava, Pallawi Upadhyaya, Kamal Tyagi1, Supriya Sarma1, Sneha Datta, Bharti Malhotra1, Sherinmol Thomas1,Anusha Sunkum, Sameera Devulapalli1, Bradley John Till, Yellamaraju Sreelakshmi,Rameshwar Sharma. NGS-based identification of induced mutations in a doubly mutagenized tomato (Solanum lycopersicum) population.The Plant Journal 92(3):495-508, 2017 (Web Link)
  • Subhas Chandra ROY, V.B. Reddy Lachagari. Assessment of SNP and InDel Variations Among Rice Lines of Tulaipanji x Ranjit. Rice Science 24 :336-348 .2017 (Web Link)
  • Sudarshan A Shetty, Rahul Bodkhe, Dhiraj P. Dhotre, Anil K Verma, Khushbo Bhatia, Asha Mishra, Gurvinder Kaur, Pranav Pande, Dhinoth K. Bangarusamy, Beena P Santosh, Rajadurai C Perumal, Vineet Ahuja, Yogesh S Shouche. Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives with Adult Celiac Disease Patients and Controls. Biorxiv 2017 (Web Link)
  • Rahul Priyadarshi, Hari Prasad Subramanyam Arremsetty, Akhilesh Kumar Singh, Durga Khandekar, Kandasamy Ulaganathan, Vinay Shenoy. Molecular stacking of wide compatibility gene, S5n and elongated uppermost internode (eui) gene into IR 58025B, an elite maintainer line of rice. J. Plant Biochemistry Biotechnology 26(4):425-435, 2017 (Web Link)
  • Sudakara Reddy S., Katageri I. S.*, Kumar N. V. Mohan, Jadhav M. P., Adiger Sateesh, Chakravartty Navajeet, Vamadevaiah H. M., Reddy V. B. Discovery of single nucleotide polymorphism in Gossypium hirsutum and G. barbadense through next generation sequencing approach. Indian Journal of Genetics and Plant Breeding 77(1):126-133, 2017 (Web Link)
  • Monika Kajal and Kashmir Singh. Small RNA profiling for identification of miRNAs involved in regulation of saponins biosynthesis in Chlorophytum borivilianum. BMC Plant Biol. 17:265, 2017 (Web Link)
  • Imchen M, Kumavath R, Barh D, Azevedo V, Ghosh P, Viana M, Wattam AR. Searching for signatures across microbial communities: Metagenomic analysis of soil samples from mangrove and other ecosystems. Sci Rep 7:8859, 2017 (Web Link)
  • Tirthankar BandyopadhyayPoonam MehraSuboot HairatJitender Giri. Morpho-physiological and transcriptome profiling reveal novel zinc deficiency-responsive genes in rice. Functional & Integrative Genomics. Funct Integr Genomics. 17(5):565-581, 2017 (Web Link)
  • Prashant SinghNaresh GollaPankaj SinghVijay Simha BaddelaSubhash ChandRubina Kumari BaithaluDheer SinghSuneel Kumar Onteru. Salivary miR-16, miR-191 and miR-223: intuitive indicators of dominant ovarian follicles in buffaloes . Molecular Genetics and Genomics (2017) (Web Link)
  • Veeriah V, Kumar P, Sundaresan L, Mafitha Z, Gupta R, Saran U, Manivannan J,Chatterjee S. Transcriptomic Analysis of Thalidomide Challenged Chick Embryo Suggests Possible Link between Impaired Vasculogenesis and Defective Organogenesis. Chem Res Toxicol. 30(10):1883-1896, 2017 (Web Link)
  • Nagamalleswari E, Nagaraja V. Draft Genome Sequence of Klebsiella pneumoniae OK8, a Multidrug-Resistant Mouse and Human Pathogen. Genome Announc. 5(37). pii: e01018-17, 2017 (Web Link)
  • Sundar, Keerthana; Premalata, C. S.; Asati, Vikas. Hepatitis B Virus Quasispecies In Hbsag Negative Dlbcl. Journal of Cancer Research & Therapeutics 13:pS61-S61. 1/4p. (Web Link)
  • Nazar N, Lakshmanan B, Jayavardhanan KK. Molecular characterization of human Dirofilaria isolates from Kerala. Indian J Med Res. 146(4):528-533. (Web Link)
  • Lalramnghaki HC, Vanlalhlimpuia, Vanramliana, Lalramliana. Characterization of a new isolate of entomopathogenic nematode, Steinernema sangi (Rhabditida, Steinernematidae), and its symbiotic bacteria Xenorhabdus vietnamensis(γ-Proteobacteria) from Mizoram, northeastern India. J Parasit Dis. 41(4):1123-1131, 2017 (Web Link)
  • Umdale SD, Kshirsagar PR, Lekhak MM, Gaikwad NB. Molecular Authentication of the Traditional Medicinal Plant "Lakshman Booti" (Smithia conferta Sm.) and Its Adulterants through DNA Barcoding. Pharmacogn Mag. 13(Suppl2):S224-S229 (Web Link)
  • Shivani Y, Subhash Y, Sasikala C, Ramana CV. Halodesulfovibrio spirochaetisodalis gen. nov. sp. nov. and reclassification of four Desulfovibrio spp. Int J Syst Evol Microbiol. 67(1):87-93, 2017 (Web Link)
  • N.N. Srikrupa, S. Srilekha, P. Sen, T. Arokiasamy, S. Meenakshi, M. Bhende, S. Kapur, N. Soumittra Genetic profile and mutation spectrum of Leber congenital amaurosis in a larger Indian cohort using high throughput targeted re‐sequencing. Clinical Genetics 93 (2):329-339, 2017 (Web Link)
  • Aishwarya Nair, K. S. Sruthy, E. R. Chaithanya, T. P. Sajeevan, I. S. Bright Singh, Rosamma Philip. Molecular Characterisation of a Novel Isoform of HepaticAntimicrobial Peptide, Hepcidin (Le-Hepc), from Leiognathus equulusand Analysis of Its Functional Properties In Silico. Probiotics & Antimicro. Prot. 9 (4): 473-482, 2017 (Web Link)
  • Laxmi V, Tamuli R. The calmodulin gene in Neurospora crassa is required for normal vegetative growth, ultraviolet survival, and sexual development. Arch Microbiol. 199(4):531-542, 2017 (Web Link)
  • Jibin John, Prachi Kukshal, Triptish Bhatia, K.V. Chowdari, V.L. Nimgaonkar, S.N. Deshpande, B.K. Thelma. Possible role of rare variants in Trace amine associated receptor 1 in schizophrenia.Schizophrenia research 189:190-195, 2017 (Web Link)
  • Vaiyapuri Murugadas,Toms C.Joseph, Kuttanapilly V.Lalitha.Tracing contamination of Methicillin-resistant Staphylococcus aureus (MRSA) into seafood marketing chain by staphylococcal protein A typing. Food control 78:43-47, 2017 (Web Link)
  • Santu KS, Nandan SB, Cleetus RI, Harikrishnan M. Reassessing the species status of Pseudodiaptomus malayalus Wellershaus, 1969 and P. binghami Sewell, 1912 (Calanoida: Pseudodiaptomidae) from India based on morphology and mitochondrial cytochrome oxidase I gene sequences. Mitochondrial DNA A DNA Mapp Seq Anal. 9:1-12, 2017 (Web Link)
  • Thomas P, Sekhar AC, Shaik SP. High taxonomic diversity of cultivation-recalcitrant endophytic bacteria in grapevine field shoots, their in vitro introduction, and unsuspected persistence. Planta. 246(5):879-898, 2017 (Web Link)
  • Jerome A, Thirumaran SMK, Kala SN. Identification of microRNAs in corpus luteum of pregnancy in buffalo (Bubalus bubalis) by deep sequencing. Iran J Vet Res. 18(4):287-290, 2017 (Web Link)
  • Kumar P, Arun V, Lokeswari TS. Cloning of BBTV (Banana Bunchy Top Virus) components and screening of BBTV using functionalized gold nanoparticles. Biotech 7(3):225,2017 (Web Link)
  • F.A. Lali, K. Anilkumar and T.V. Aravindakshan. Novel SNP and Unique Sequences in ATP-binding Cassette Super Family-G Member-2 Transporter (ABCG2) Gene of Vechur cattle (Bos indicus). Indian J. Anim. Res., 2017 (Web Link)
  • Esakkiraj P, Antonyraj CB, Meleppat B, Ankaiah D, Ayyanna R, Ahamed SIB, Arul V. Molecular characterization and application of lipase from Bacillus sp. PU1 and investigation of structural changes based on pH and temperature using MD simulation. Int J Biol Macromol.103:47-56, 2017 (Web Link)
  • Talwar P, Kanojia N, Mahendru S, Baghel R, Grover S, Arora G, Grewal GK, Parween S, Srivastava A, Singh M, Vig S, Kushwaha S, Sharma S, Bala K; Indian Genome Variation Consortium, Kukreti S, Kukreti R. Genetic contribution of CYP1A1 variant on treatment outcome in epilepsy patients: a functional and interethnic perspective. Pharmacogenomics J. 17(3):242-251, 2017 (Web Link)
  • Anupama Vijayakumari Nadaraja, Ananthanarayan Jayakumaran Nair, Mary Prameela, Neethu Hari, Nidhin Balakrishnan. Evaluation of currently employed food preservation conditions to tackle biofilm forming food pathogens. Journal of Food Safety 38(1):e12407, 2017 (Web Link)
  • Tarafdar A, Sinha A. Estimation of decrease in cancer risk by biodegradation of PAHs content from an urban traffic soil. Environ Sci Pollut Res Int. 24(11):10373-10380, 2017 (Web Link)
  • Silvester R, Alexander D, Antony AC, Hatha M. GroEL PCR- RFLP - An efficient tool to discriminate closely related pathogenic Vibrio species. Microb Pathog.105:196-200, 2017 (Web Link)
  • Augustine S, Sabu L, Lakshmanan B. Molecular identification of Babesia spp. In naturally infected dogs of Kerala, South India. J Parasit Dis. 41(2):459-462, 2017 (Web Link)
  • Emilda Rosmine, Neethu Changanedassery Sainjan, Reshma ilvester, Aneesa Alikkunju, Saramma Aikkarakunnath Varghese. Statistical optimisation of xylanase production by estuarine Streptomyces sp. and its application in clarification of fruit juice. Journal of Genetic Engineering & Biotechnology 15(2):392-401, 2017 (Web Link)
  • Dutta J, Thakur D. Evaluation of multifarious plant growth promoting traits, antagonistic potential and phylogenetic affiliation of rhizobacteria associated with commercial tea plants grown in Darjeeling, India. PLoS One. 12(8):e0182302, 2017 (Web Link)
  • Whole metagenome analysis of extreme environment samples by quasi-linear whole genome amplification Beena PS, Rajadurai CP, Aswathy S, Tintu Joy, Saju Michel, Sam Santhosh, Dhinoth Kumar Bangarusamy. MOJ Proteomics Bioinform. 4(5):318 323, 2016 (Web Link)
  • K.V.N. Rathnakar Reddi, A. Krishna Satya, P. Ramesh, Sivaram P. Lekkala, K. Narendra, P. Chandra Obul Reddy, C. V. C. M. Reddy and A. Chandra Sekhar. Molecular genetic assessment of Jatropha Curcas L. Germplasm of diverse origin along with its wild relatives for various early growth and establishment related traits. Int J Pharm Bio Sci 7(4): (B) 261 - 271, 2016 (Web Link)
  • Antony HA, Pathak V, Parija SC, Ghosh K, Bhattacherjee A. Whole transcriptome expression analysis and comparison of two different strains of Plasmodium falciparum using RNA-Seq. Genom Data 8:110-112, 2016 (Web Link)
  • Antony HA, Pathak V, Parija SC, Ghosh K, Bhattacherjee A. Transcriptomic Analysis of Chloroquine-Sensitive and Chloroquine-Resistant Strains of Plasmodium falciparum: Toward Malaria Diagnostics and Therapeutics for Global Health. OMICS 20(7):424-432, 2016 (Web Link)
  • I. Pamei and R. Makandar,Association of 16SrII-D Phytoplasma With Phyllody Disease in Sesame (Sesamum indicum) in Telangana From Southern India. Plant Disease 100 (8):1774, 2016 (Web Link)
  • M. Prasanth, Meera Raju, S. Divakar, S. Abirami, H. Hajarah, K. Uma Harini, S. Senthilnathan and Benedict Paul C Detection of Gele and Factors Affecting Gelatinase Activity of Enterococcus Faecalis Isolatesasian Jr. of Microbiol. Biotech. Env. Sc. 18(1): 257-261 (Web Link)
  • Joseph Vimal, Akhil Venu, and Jini Joseph. Isolation and identification of cellulose degrading bacteria and optimization of the cellulase production Int. J. Res. Biosciences, 5(3), 58-67, 2016 (Web Link)
  • L Rupa, A Srikantam, SS Lakshmana Rao, U Devi, KSR Sivasai. Molecular analysis of Rv0679c and Rv0180c genes of Mycobacterium tuberculosis from clinical isolates of pulmonary tuberculosis. Ind. J. Medical Microbiology 34(4), 471-475, 2016 (Web Link)
  • Ch. V. Chandrika Ray and M. Hema. cis-Proteolytic Activity of a Recombinant Nuclear Inclusion a (NIa) Proteinase from Sugarcane Streak Mosaic Virus, a Member of the Genus Poacevirus in the Family Potyviridae1 Molecular Genetics, Microbiology and Virology 31(2), 102–108, 2016 (Web Link)
  • Palanichamy Esakkiraj, Balraj Meleppat, Avinash Kant Lakra, Repally Ayyanna and Venkatesan Arul. Cloning, expression, characterization and application of protease produced by Bacillus cereus PMW. RSC Adv. 6(45), 38611-38616 (Web Link)
  • Mehetre GT, Paranjpe A, Dastager SG, Dharne MS. Investigation of Microbial Diversity in Geothermal Hot Springs in Unkeshwar, India, Based on 16S rRNA Amplicon Metagenome Sequencing. Genome Announc 4(1):e01766-15, 2016 (Web Link)
  • J. Aishwarya,Chintu Ravishankar, R. Rajasekhar, K. Sumod, Nimisha Bhaskar, Shiju Shaji, Koshy John, M. Mini. First report of detection and molecular characterization of porcine parvovirus in domestic and wild pigs in Kerala, India. Virusdisease 27(3): 311–314, 2016 (Web Link)
  • K. M. Fathima Shaheena, D. Girija, K. Surendra Gopal, P. Sureshkumar, P. G. Sadhan Kumar. Novel free living diazotrophs associated with black pepper in Wayanad. Journal of Tropical Agriculture 54(1), 2016 (Web Link)
  • Bhanita Devi, Subimal Laskar, Prabodh Borah, Iftikar Hussain & Panch Kishor Bharti. Sequencing and phylogenetic analysis of the SLC11A1 gene in pigs. 45(1):494-497, 2016 (Web Link)
  • De Mandal S, Zothansanga, Panda AK, Bisht SS, Senthil Kumar N. MiSeq HV4 16S rRNA gene analysis of bacterial community composition among the cave sediments of Indo-Burma biodiversity hotspot. Environ Sci Pollut Res Int. 23(12):12216-26, 2016 (Web Link)
  • Khushboo J. Nagdev, Sharda P. Bhagchandani, Shradha S. Bhullar, Rajkumar C. Kapgate, Rajpal S. Kashyap, Nitin H. Chandak, Hatim F. Daginawala, Hemant J. Purohit, Girdhar M. Taori. Rapid Diagnosis and Simultaneous Identification of Tuberculous and Bacterial Meningitis by a Newly Developed Duplex Polymerase Chain Reaction. Indian Journal of Microbiology 55(2):213-218, 2015 (Web Link)
  • Krishanender Dinesh, Archana Verma, Ishwar Das Gupta, Yash Pal Thakur, Nishant Verma, Ashwani Arya. Identification of polymorphism in exons 7 and 12 of lactoferrin gene and its association with incidence of clinical mastitis in Murrah buffalo. Tropical Animal Health and Production. 47(4):643-647, 2015 (Web Link)
  • Reshma Silvester, Deborah Alexander, Mohamed Hatha Abdulla Ammanamveetil. Prevalence, antibiotic resistance, virulence and plasmid profiles of Vibrio parahaemolyticus from a tropical estuary and adjoining traditional prawn farm along the southwest coast of India. Annals of Microbiology 65(4):2141-2149, 2015(Web Link)
  • S Sharma, S M Javadekar, M Pandey, M Srivastava, R Kumari and S C Raghavan. Homology and enzymatic requirements of microhomology-dependent alternative end joining. Cell Death and Disease 6:e1697 (Web Link)
  • V. F. Sanu, S. Bijoy Nandan, J. Deepak, M. Harikrishnan. Molecular identification and systematic assessment of Labidocera madurae A. Scott, 1909 (calanoid copepod) from Lakshadweep Archipelago, southwest coast of India, based on mitochondrial COI gene sequences. Springer Berlin Heidelberg, Marine Biodiversity. 46(1):95-103, 2015 (Web Link)
  • T. E. Sheeja, K. Deepa, R. Santhi, B. Sasikumar. Comparative Transcriptome Analysis of Two Species of Curcuma Contrasting in a High-Value Compound Curcumin: Insights into Genetic Basis and Regulation of Biosynthesis. Plant Molecular Biology Reporter, Springer US. 35(6):1825-1836 (Web Link)
  • N. Sudhakar, C. George Priya Doss, D. Thirumal Kumar, Chiranjib Chakraborty, Kushi Anand & M. Suresh. Deciphering the impact of somatic mutations in exon 20 and exon 9 of PIK3CA gene in breast tumors among Indian women through molecular dynamics approach. Journal of Biomolecular Structure and Dynamics. 34(1):29-41 (Web Link)
  • EA George, S Sankar, MV Jesudasan, C Sudandiradoss, B Nandagopal. Molecular characterization of CTX-M type Extended Spectrum Beta Lactamase producing E. coli isolated from humans and the environment. Indian Journal of Medical Microbiology 33(5):73-79, 2015 (Web Link)
  • YPS Malik, N Kumar, V Rawat, K Sharma, A Kumar, M Singhai, M Kumar. Detection and distribution pattern of prevalent genotypes of Hepatitis-C virus among chronic hepatitis patients from Kumaon region of Uttarakhand, India. Indian Journal of Medical Microbiology 33 Suppl:73-93, 2015 (Web Link)
  • Mashhoor K., Lazar K.V., ShanasS. and Ramesh N. Mitochondrial DNA analysis revealed Gondwanan origin of the Common Evening Brown butterfly, Melanitis leda (Lepidoptera: Nymphalidae). Journal of Agricultural Technology 11(3):649-656, 2015 (Web Link)
  • Susheel Kumar Sharma, P. Vignesh Kumar, A. Swapna Geetanjali, Khem Bahadur Pun, Virendra Kumar Baranwal. Subpopulation level variation of banana streak viruses in India and common evolution of banana and sugarcane badnaviruses. Virus Genes 50(3):450-465, 2015 (Web Link)
  • Shyamalina Haldar and Sanghamitra Sengupta.Impact of plant development on the rhizobacterial population of Arachis hypogaea: a multifactorial analysis. J Basic Microbiol. 55(7):922-8, 2015 (Web Link)
  • Aggarwal RK, Dawar C, Das S, Sharma S. 2015. Draft genome sequences of two drug-resistant isolates of Pseudomonas aeruginosa obtained from keratitis patients in India. Genome Announc 3(1). pii: e01404-14, 2015(Web Link)
  • Gudikandula Krishna, Burra Samatha, S. V. S. S. S. L. Hima Bindu Nidadavolu, Metuku Ram Prasad, Byram Rajitha, and Maringanti Alha Singara Charaya. Macrofungi in Some Forests of Telangana State, India. Journal of Mycology. 2015, Article ID 382476, 7 pages.(Web Link)
  • Singh Satbir and Bijender Kumar Bajaj. Medium Optimization for Enhanced Production of Protease with Industrially Desirable Attributes from Bacillus subtilis K-1. Chemical Engineering Communications 202(8), 2015 (Web Link)
  • Nidheesh.T, Pal Gaurav Kumar, and P.V. Suresh. Enzymatic degradation of chitosan and production of d-glucosamine by solid substrate fermentation of exo-β-d-glucosaminidase (exochitosanase) by Penicilliumdecumbens CFRNT15. International Biodeterioration & Biodegradation 97: 97-106, 2015 (Web Link)
  • Ambardar, Sheetal, Naseer Sangwan, A. Manjula, J. Rajendhran, P. Gunasekaran, Rup Lal, and JyotiVakhlu. Identification of bacteria associated with underground parts of Crocus sativus by 16S rRNA gene targeted metagenomic approach. World Journal of Microbiology and Biotechnology 30(10):2701-2709, 2014 (Web Link)
  • Bindu, P. U., and C. D. Sebastian. Genetic structure of mitochondrial cytochrome oxidase subunit I gene of the mosquito, Armigeressubalbatus. International Journal of Research 1(10): 49-56, 2014 (Web Link)
  • Reshamwala, Shamlan, Sandip K. Pagar, Vishal S. Velhal, Vijay M. Maranholakar, Vishal G. Talangkar, and Arvind M. Lali. Construction of an efficient Escherichia coli whole-cell biocatalyst for d-mannitol production. J Biosci Bioeng. 118(6):628-31, 2014 (Web Link)
  • Manimekalai, Ramaswamy, Roshna Othayoth Mailapravan, Gangaraj Kariyath Palliyath, Smita Nair, Rasappa Viswanathan, and R. Rabindran. Molecular characterization based on spermidine/putrescine ABC transporter gene of sugarcane grassy shoot (16SrXI), coconut root wilt (16SrXI), aster yellows (16SrI) and brinjal little leaf (16SrVI) phytoplasmas. Phytopathogenic Mollicutes 4(1): 16-21, 2014 (Web Link)
  • Soman, Manju, Sreeja R. Nair, M. Mini, Binu K. Mani, and Siju Joseph. Isolation and polymerase chain reaction-based identification of Riemerellaanatipestifer from ducks in Kerala, India. Veterinary World 7(10): 765-769, 2014 (Web Link)
  • Lalhmangaihi, Ralte, Souvik Ghatak, Ramachandra Laha, Guruswami Gurusubramanian, and Nachimuthu Senthil Kumar. Protocol for Optimal Quality and Quantity Pollen DNA Isolation from Honey Samples. Journal of biomolecular techniques 25(4):92-5, 2014 (Web Link)
  • Dev, Suma Arun, E. M. Muralidharan, P. Sujanapal, and M. Balasundaran. Identification of market adulterants in East Indian sandalwood using DNA barcoding. Annals of Forest Science 71(4): 517-522, 2014 (Web Link)
  • Najm, Mohammad Zeeshan, Salman Akhtar, Istaq Ahmad, Shilpi Chattopadhyay, Nasar Mallick, Sarah Siddiqui, Shuaib Zaidi, Waseem Ahmad Siddiqui, and Syed Akhtar Husain. Mutation and protein expression analysis of CYP1A1 gene—a study on female breast cancer cases from India. Tumor Biology 35(3):1965-1971, 2014 (Web Link)
  • Birmole, Radhika, Swamini Patade, Vishwas Sirwaiya, and Firdaus Bargir. Biodegradation study of reactive blue 172 by DW01 Isolated from lake sediment. Indian J. Sci. Res 5(1): 139-152, 2014 (Web Link)
  • Mohan. V, K. Saranya Devi, R. Srinivasan, and K.Sushamani. In-vitro Evaluation of Chromium Tolerant Plant Growth Promoting Bacteria from Tannery Sludge Sample, Dindugal, Tamil Nadu, India. Int. J. Curr. Microbiol. App. Sci 3(10): 336-344, 2014 (Web Link)
  • Malik Yashpal Singh, Naveen Kumar, Kuldeep Sharma, Souvik Ghosh, Krisztián Bányai, Ganesh Balasubramanian, Nobumichi Kobayashi and Jelle Matthijnssens. Molecular analysis of non structural rotavirus group A enterotoxin gene of bovine origin from India. Infection, Genetics and Evolution 25 (2014): 20-27. (Web Link)
  • Yadav, Shashi, Dev Kumar Verma, Pravata Kumar Pradhan, Anoop Kumar Dobriyal, and Neeraj Sood. Phenotypic and genotypic identification of Aeromonas species from aquatic environment. Int. J. Aqu. Sci 5(1): 3-20, 2014 (Web Link)
  • Maheswaran.S, S.S.Dasuru, A.Rama Chandra Murthy, B.Bhuvaneshwari, V.Ramesh Kumar, G.S.Palani, Nagesh R.Iyer, Sarayu Krishnamoorthy, and S.Sandhya. Strength improvement studies using new type wild strain Bacillus cereus on cement mortar. CURRENT SCIENCE 106(1): 50, 2014 (Web Link)
  • Patagundi, Basavaraj.I, C.T.Shivasharan, and B.B.Kaliwal. Isolation and Characterization of Cellulase producing bacteria from Soil. Int. J. Curr. Microbiol. App. Sci 3(5): 59-69, 2014 (Web Link)
  • Rajan, Iyyappan, Remitha Rabindran, N. Nithya, T. Lakshmipriya, P.R. Jayasree, and P.R.M. Kumar. Assessment of cell cycle phase-specific effects of zerumbone on mitotically synchronous surface cultures of Physarum polycephalum. Protoplasma 251(4):931-941, 2014 (Web Link)
  • Brahmacharimayum, Bharati, and Pranab Kumar Ghosh. Sulfate bioreduction and elemental sulfur formation in a packed bed reactor. Journal of Environmental Chemical Engineering 2(3):1287-1293 (Web Link)
  • Ravishankar Vigneshwaran, Ahmed Ahmed, Ulaganathan Sivagnanam, Krishnaraja Muthuraman, Anbarasu Karthikaichamy, Herald A. Wilson, Ajay Devendran, Rudy A. Hartskeerl, and Stephen ML Raj. Evolution of the RNase PRNA structural domain in Leptospira spp. Research in microbiology 165(10):813-25, 2014 (Web Link)
  • Swetha.V.P, V.A.Parvathy, T.E.Sheeja, and B.Sasikumar. DNA Barcoding for Discriminating the Economically Important Cinnamomumverum from Its Adulterants. Food Biotechnology 28(3): 183-194, 2014 (Web Link)
  • Juliane Mooz, Tripat Kaur Oberoi-Khanuja, Gregory S. Harms, Weiru Wang, Bijay S.Jaiswal, Somasekar Seshagiri, Ritva Tikkanen and Krishnaraj, Rajalingam, Dimerization of the kinase ARAF promotes MAPK pathway activation and cell migration. Science Signaling 7(337):ra73, 2014 (Web Link)
  • V.A.Parvathy, V.P.Swetha, T.E.Sheeja, N.K.Leela, B.Chempakam & B.Sasikumar, DNA Barcoding to Detect Chilli Adulteration in Traded Black Pepper Powder. Food Biotechnology. 28(1)25-40. (Web Link)
  • Jalaja Vidya, Mrudula Vasudevan Ushasree, Ashok Pandey. Effect of surface charge alteration on stability of l-asparaginase II from Escherichia sp. Enzyme and Microbial Technology 56:15-19, 2014 (Web Link)
  • Vasudevan Gowthaman, Sambhu Dayal Singh, Kuldeep Dhama, Rajamani Barathidasan, Basavaraj S. Mathapati, Palani Srinivasan, Sellappan Saravanan, Muthannan Andavar Ramakrishnan. Molecular detection and characterization of infectious laryngotracheitis virus (Gallid herpesvirus-1) from clinical samples of commercial poultry flocks in India. Journal of Parasitic Diseases 25(3):345-349, 2014 (Web Link)
  • Nibedita Rana, Basanta K.Das. Morphometric and molecular identification of Paradactylogyrus catlaius (Thapar 1948) in Catla catla (Hamilton 1822). Journal of Parasitic Diseases 40(1):36-40, 2014 (Web Link)
  • Abdul Kareem Abdulrazak Al-kazaz. Sequence Variation and Phylogenetic Relationships Among Ten Iraqi Rice Varieties Using RM171 Marker Iraqi Journal of Science 55(1):145-150, 2014 (Web Link)
  • Mohammad Zeeshan Najm, Salman Akhtar, Istaq Ahmad, Shilpi Chattopadhyay, Nasar Mallick, Sarah Siddiqui, Shuaib Zaidi, Waseem Ahmad Siddiqui, Syed Akhtar Husain. Mutation and protein expression analysis of CYP1A1 gene—a study on female breast cancer cases from India. Tumor Biology 35(3):1965-1971, 2014 (Web Link)
  • Yashpal Singh Malik, Naveen Kumar, Kuldeep Sharma, Souvik Ghosh, Krisztián Bányai, Ganesh Balasubramanian, Nobumichi Kobayashi, Jelle Matthijnssens. Molecular analysis of non structural rotavirus group A enterotoxin gene of bovine origin from India. Infection, Genetics and Evolution 25:20-27, 2014 (Web Link)
  • Shashi Yadav, Dev Kumar Verma, Pravata Kumar Pradhan, Anoop Kumar Dobriyal and Neeraj Sood. Phenotypic and genotypic identification of Aeromonas species from aquatic environment. International Journal of Aquatic Science 5(1): 3-20, 2014. (Web Link)
  • S.O.Sadashiv and B.B.Kaliwa. Isolation, characterization and antibiotic resistance of Bacillus sps. from bovine mastitis in the region of north Karnataka, India. Int.J.Curr.Microbiol.App.Sci 3(4): 360-373, 2014 (Web Link)
  • Larance Ronsard,, Sneh Lata, Jyotsna Singh, Vishnampettai G.Ramachandran, Shukla Das, Akhil C.Banerjea. Molecular and Genetic Characterization of Natural HIV-1 Tat Exon-1 Variants from North India and Their Functional Implications. PLOS ONE 9(1):e85452, 2014 (Web Link)
  • Shukla.S, Shukla.S.K, Sharma.R and Kumar A. Identification of Mycobacterium species from apparently healthy freshwater aquarium fish using partial sequencing and PCR-RFLP analysis of heat shock protein (hsp65) gene. Journal of Applied Ichthyology 30(3):513-520, 2014 (Web Link)
  • Iyyappan Rajan, Remitha Rabindran, N. Nithya, T. Lakshmipriya, P.R. Jayasree, P.R. M. Kumar. Assessment of cell cycle phase-specific effects of zerumbone on mitotically synchronous surface cultures of Physarum polycephalum. Protoplasma 251(4):931-41, 2014 (Web Link)
  • P.K.Anil Kumar, P.V. Suresh. Biodegradation of Shrimp Biowaste by Marine Exiguobacterium sp. CFR26M and Concomitant Production of Extracellular Protease and Antioxidant Materials: Production and Process Optimization by Response Surface Methodology. Marine Biotechnology 16(2):202-18, 2014 (Web Link)
  • Akansha Bhatia, Sangeeta Madan, Jitendra Sahoo, Muntjeer Ali, Ranjana Pathania, Absar Ahmed Kazmi, Modak, A., Bhaumik, Phale P. S. Periplasmic glucose-binding protein fromPseudomonas putida CSV86 – identification of the glucose-binding pocket by homology-model-guided site-specific mutagenesis. FEBS Journal 281(1):365-75, 2014 (Web Link)
  • Krishna, Vamshi, Siju Joseph, R. Ambily, M. Mini, Liya Anto, and Sheethal G. Mohan. Cloning and sequencing of the virulent gene LipL32 of Leptospira interrogans serovar Autumnalis. Veterinary World 6(4):193-195, 2013 (Web Link)
  • Amitabha Chaudhuri, Nicholas S Wilson, Becky Yang, Andres Paler Martinez, Jinfeng Liu, Catherine Zhu, Nicole Bricker, Suzana Couto, Zora Modrusan, Dorothy French, James Cupp and Avi Ashkenazi.Host genetic background impacts modulation of the TLR4 pathway by RON in tissue-associated macrophages. Immunology and Cell Biology 91(7):451-60, 2013 (Web Link)
  • Naveen Sathyan, Rosamma Philip, E. R. Chaithanya, P. R. Anil Kumar, V. N. Sanjeevan, and I. S. Bright Singh. Characterization of Histone H2A Derived Antimicrobial Peptides, Harriottins, from Sicklefin Chimaera Neoharriotta pinnata (Schnakenbeck, 1931) and Its Evolutionary Divergence with respect to CO1 and Histone H2A.ISRN Molecular Biology 2013 Article ID 930216, 10 pages, 2013 (Web Link)
  • Malik.Y.S, Kumar.N, Sharma.K, Haq.A.A, Kumar.A, Prasad.M (2013). Sequence and Phylogenetic Analysis of Bovine Rotavirus Isolates (G6 Genotypes) from India. Adv. Anim. Vet. Sci.1(1): 41-43, 2013 (Web Link)
  • Leya Thomas, Raveendran Sindhu, Ashok Pandey. Identification and characterization of a highly alkaline and thermotolerant novel xylanase from Streptomyces sp. Biologia. 68(6): 1022-1027, 2013 (Web Link)
  • DebR, SinghU KumarS, TyagiS, SharmaA, KumarA, SengarG, SinghR(2013). Characterization and Evaluation of BL41 Microsatellite MarkerAssociated with Milk Fat and Protein Percentage among Frieswal (HF x Sahiwal ) Cattle of Indian Origin. Adv. Anim.Vet. Sci. 1(3): 77 -79, 2013 (Web Link)
  • Mashhoor.K, Kottickal L.V, Shanas S and Ramesh.N. Genetic structure and phylogenetic status of rice black bug, scotinophara bispinosa (Hemiptera: Pentatomidae). Journal of Agricultural Technology 9(6):1447-1452, 2013 (Web Link)
  • E. R. Chaithanya, Rosamma Philip, Naveen Sathyan, and P. R. Anil Kumar. Molecular Characterization and Phylogenetic Analysis of a Histone-Derived Antimicrobial Peptide Teleostin from the Marine Teleost Fishes, Tachysurus jella and Cynoglossus semifasciatus. ISRN Molecular Biology 2013 (2013), Article ID 185807, 7 pages, 2013 (Web Link)
  • Ann Rose Bright, Naveen Sathyan, Swapna P. Antony, T.J.James, Rosamma Philip. Phylogeny and genetic divergence of three phenotypic variants of the ornamental goldfish, Carassius auratus (Linnaeus, 1758) based on CO1 gene. International Journal of Research in Zoology 3(1): 4-9, 2013 (Web Link)
  • P. Valarmathi.R, Rabindran.R, Velazhahan.S, Suresh.S, Robin. First report of Rice orange leaf disease phytoplasma (16 SrI) in rice (Oryza sativa) in India. Australasian Plant Pathology Society Inc. 8(1):pp 141–143 (Web Link)
  • E. R. Chaithanya, Rosamma Philip, Naveen Sathyan, P. R. Anil Kumar, Swapna P. Antony, V. N. Sanjeevan, I. S. Bright Singh. A Novel Isoform of the Hepatic Antimicrobial Peptide, Hepcidin (Hepc-CB1), from a Deep-Sea Fish, the Spinyjaw Greeneye Chlorophthalmus bicornis (Norman, 1939). Molecular Characterisation and Phylogeny. Probiotics and Antimicrobial Proteins 5(1), pp 1-7, 2013 (Web Link)
  • Naveen Chandra Suryadevara,Venkata Sanjeev Kumar Neela, Kamakshi Prudhula Devalraju, Suman Jain, Krovvidi S.R. SivaSai, Vijaya Lakshmi Valluri, Subbanna Jonnalagada, MPJS Anandaraj. Influence of Intron II microsatellite polymorphism in human toll-like receptor 2 gene in leprosy. Human Immunology 74(8):1034–1040, 2013 (Web Link)
  • John Lijo, Panicker Varuna P, George Sisilamma. Polymorphism analysis of Hsp70 gene in chicken and duck. Indian Journal of Poultry Science 47(2):129-135, 2013 (Web Link)
  • J. Kiruthika, S. Rajesh, A.G. Ponniah, M.S. Shekhar. Molecular cloning and characterization of acyl-CoA binding protein (ACBP) gene from shrimp Penaeus monodon exposed to salinity stress. Developmental & Comparative Immunology 40(1):78–82, 2013 (Web Link)
  • M.S. Shekhar, J. Kiruthika, A.G. Ponniah. Identification and expression analysis of differentially expressed genes from shrimp (Penaeus monodon) in response to low salinity stress. Fish & Shellfish Immunology 35(6):1957–1968, 2013 (Web Link)
  • Suma Arun Dev, E. M. Muralidharan, P. Sujanapal, M. Balasundaran. Identification of market adulterants in East Indian sandalwood using DNA barcoding. Annals of Forest Science 71(4):517-522, 2013 (Web Link)
  • V.V. Afsal, Swapna P. Antony, Ann Rose Bright, Rosamma Philip. Molecular identification and characterization of Type I crustin isoforms from the hemocytes of portunid crabs, Scylla tranquebarica and Portunus pelagicus. Cellular Immunology 284 (1–2):45–50, 2013 (Web Link)
  • E.R. Chaithanya, Rosamma Philip, Naveen Sathyan, P. R. Anil Kumar, Sherine Sonia Cubelio, I. S. Bright Singh. Molecular Characterisation and Phylogenetic Analysis of a Novel Isoform of Hepatic Antimicrobial Peptide, Hepcidin (Zc-hepc1), from the Coral Fish Moorish idol, Zanclus cornutus (Linnaeus, 1758). Probiotics and Antimicrobial Proteins 5(3):187-194, 2013 (Web Link)
  • Steven G. Newmaster, Subramanyam Ragupathy, Shanmughanandhan Dhivya, Chitilappilly Joseph Jijo, Ramalingam Sathishkumar, Kirit Patel. Genomic valorization of the fine scale classification of small millet landraces in southern India. Genome 56(2): 123-127, 2013 (Web Link)
  • Vijesh Kumar IP, Reena N, Anandaraj M, Eapen SJ, Johnson GK, et al. Amplification, Cloning and In silico Prediction of Full Length Elicitin Gene from Phytophthora capsici, the Causal Agent of Foot Rot Disease of Black Pepper. J Plant Pathol Microb 4: 181 (Web Link)
  • Sanjoy Das, K. V. Lalitha, Nirmala Thampuran. Isolation and molecular characterisation of atypical enterotoxigenic Bacillus cereus with negative Voges-Proskauer reaction from Indian white shrimp Fenneropenaeus indicus (H. Milne Edwards, 1837). Indian J. Fish. 60(4) : 113-117, 2013. (Web Link)
  • Vinesh P.V, Biswajit Brahma, Rupinder Kaur, Tirtha Kumar Datta, Surender Lal Goswami, Sachinandan De. Characterization of β-casein gene in Indian riverine buffalo. Gene 527(2): 683–688, 2013 (Web Link)
  • Mridula Nambiar and Sathees C. Raghavan. G-Quadruplex Structures Formed at the HOX11 Breakpoint Region Contribute to Its Fragility during t(10;14) Translocation in T-Cell Leukemia Mol. Cell. Biol. 33: 4266-4281. (Web Link)
  • Singaiah NaveenKumar, Malathi Shekar, Iddya Karunasagar, Indrani Karunasagar. Genetic analysis of RNA1and RNA2 of Macrobrachium rosenbergii nodavirus (MrNV) isolated from India. Virus Research 173(2):377–385, 2013 (Web Link)
  • Gautam Pareek, Vivekanandhan Krishnamoorthy and Patrick D'Silva. Molecular Insights Revealing Interaction of Tim23 and Channel Subunits of Presequence Translocase. Mol. Cell. Biol. 33(23):4641-4659, 2013 (Web Link)
  • Maqbool, Raihana, Ismail, Rehana, Mahboob-ul-Hussain. Mutations in MicroRNA Genes and Their Binding Sites are Infrequently Associated with Human Colorectal Cancer in the Kashmiri Population. Bentham Science Publishers, MicroRNA 2(3):219-224, 2013 (Web Link)
  • Singaiah Naveen Kumar, Indrani Karunasagar ,Iddya Karunasagar. Protection of Macrobrachium rosenbergii against white tail disease by oral administration of bacterial expressed and encapsulated double-stranded RNA. Fish & Shellfish Immunology 35(3): 833–839, 2013 (Web Link)
  • S.C.R. Thumu and P.M. Halami. Phenotypic expression, molecular characterization and transferability of erythromycin resistance genes in Enterococcus spp. isolated from naturally fermented food. Journal of Applied Microbiology 116(3):689–699, 2013 (Web Link)
  • M.K. Rajesh, B.A. Jerard, P. Preethi, Regi Jacob Thomas, T.P. Fayas, K.E. Rachana, Anitha Karun. Development of a RAPD-derived SCAR marker associated with tall-type palm trait in coconut. Scientia Horticulturae 150: 312–316, 2013 (Web Link)
  • Bhatia A et al., Diversity of bacterial isolates during full scale rotary drum composting. Waste Management 33(7):1595-1601, 2013 (Web Link)
  • Krishnakumar Bhaskaran, Anupama Vijaya Nadaraja, Soumya Tumbath, Liji Babu Shah, Prajeesh Gangadharan Puthiya Veetil. Phytoremediation of perchlorate by free floating macrophytes: Journal of Hazardous Materials 260:901-906, 2013 (Web Link)
  • Rbin Kurian Abraham, R. A Pyron, Ansil B. R., Arun Zachriah & Anil Zachriah. Two novel genera and one new species of treefrog (Anura: Rhacophoridae) highlight cryptic diversity in the Western Ghats of India. Zootaxa. 3640 (2): 177–189. (Web Link)
  • Sheela Thankakkon and Patterson Edward, J.K. Molecular Phylogenetic analysis of two closely related marine Indian mussels of Genus Perna (PHILIPSSON, 1788) based on mitochondrial (COI) and nuclear (ITS) genes. Journal of Aquatic Biology & Fisheries 1(1 & 2): 123-139, 2013 (Web Link)
  • M.S. Ghayal, M.T. Pandya. Microalgae Biomass: A Renewable Source of Energy. Energy Procedia. 32 :242–250, 2013 (Web Link)
  • S. Rajesh, J. Kiruthika, A.G. Ponniah, M.S. Shekhar. Identification, cloning and expression analysis of Catechol-O-methyltransferase (COMT) gene from shrimp, Penaeus monodon and its relevance to salinity stress. Fish & Shellfish Immunology 32(5):693-699, 2012 (Web Link)
  • V.V. Afsal, Swapna P. Antony, V.N. Sanjeevan, P.R. Anil Kumar, I.S. Bright Singh C, Rosamma Philip. A new isoform of anti-lipopolysaccharide factor identified from the blue swimmer crab, Portunus pelagicus: Molecular characteristics and phylogeny. Aquaculture. 356–357 : 119–122, 2012 (Web Link)
  • V.V. Afsal, Swapna P. Antony, E.R. Chaithanya, I.S. Bright Singh, Rosamma Philip. Two isoforms of anti-lipopolysaccharide factors identified and characterized from the hemocytes of portunid crabs, Portunus pelagicus and Scylla tranquebarica. Molecular Immunology. 52(3-4):258-263, 2012, Pages 258–263. (Web Link)
  • Abani Kanta Naik, Sathees C. Raghavan. Differential Reaction Kinetics, Cleavage Complex Formation, and Nonamer Binding Domain Dependence Dictate the Structure-Specific and Sequence-Specific Nuclease Activity of RAGs. Journal of Molecular Biology 415(3):475-488, 2012. (Web Link)
  • Mridula Nambiar and Sathees C. Raghavan. Mechanism of Fragility at BCL2 Gene Minor Breakpoint Cluster Region during t(14;18) Chromosomal Translocation. The Journal of Biological Chemistry, 287(12):8688-701, 2012 (Web Link)
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